基于网络药理学探讨青蒿治疗狼疮性肾炎的作用靶点分析
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1.云南中医药大学;2.云南中医药大学第一附属医院

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云南省教育厅治疗痹证中医中药研究中心项目(编号:2023GYB08);云南省科技人才和平台计划(编号:202105AG070012XS23059)


Network-based pharmacology to explore the target analysis of the action of Artemisia caruifolia in the treatment of lupus nephritis
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1.Yunnan University of Chinese Medicine;2.The First Affiliated Hospital of Yunnan University of Chinese Medicine

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    摘要:

    目的 基于网络药理学探究青蒿治疗狼疮性肾炎的作用靶点及潜在作用机制。方法 通过TCMSP数据库检索出青蒿中所含有的化学有效成分及作用靶点,并经 Uniprot 数据库进行名称标准化处理。再利用OMIM和GeneCards数据库检索LN相关基因,利用R软件绘制韦恩图并筛选出青蒿治疗LN的共同作用靶点,利用String数据库构建蛋白互作PPI网络,利用 Cytoscape3.8.0 软件构建药物-疾病-靶点网络可视图并筛选出核心基因,对共同作用靶基因进行GO功能富集和KEGG通路富集分析。结果 从青蒿中筛选得到22个有效成分,去除重复靶点得青蒿靶点42个,LN中相关靶点有842个,利用韦恩图筛选出药物-疾病共同靶点10个。GO功能富集分析显示青蒿治疗LN生物学过程和功能主要集中在细菌反应、膜微区、细胞因子受体结合、信号受体调节活性等。KEGG通路富集分析显示,青蒿治疗LN主要与AGE-RAGE信号通路,流体剪切应力,TNF信号通路,血脂和动脉粥样硬化,PI3K/AKT信号通路和IL-17信号通路等相关。结论 通过分析药物主要活性成分,构建PPI网络和青蒿-活性成分-靶点-疾病网络图并进行GO功能富集和KEGG通路富集分析,揭示青蒿治疗LN具有多成分、多靶点和多通路的作用特点,为青蒿临床应用治疗LN的机制提供了思路和方法。

    Abstract:

    Objective To investigate the target and potential mechanism of action of Artemisia caruifolia in the treatment of lupus nephritis based on network pharmacology. Methods The chemical active ingredients and targets contained in Artemisia caruifolia were retrieved from TCMSP database, and the names were standardized in Uniprot database. We then searched LN-related genes using OMIM and GeneCards databases, drew a Wayne diagram using R software and screened out the common targets of Artemisia caruifolia for the treatment of LN, constructed a protein-protein interactions (PPI) network using the String database, and constructed a drug-disease-target (DDT) network using the Cytoscape 3.8.0 software, and then screened out core genes, and then performed GO functional enrichment and KTD on common target genes. The core genes were screened out and analyzed for GO function enrichment and KEGG pathway enrichment. Results 22 active ingredients were obtained from Artemisia caruifolia, 42 targets were obtained by removing duplicates, 842 targets were related to LN, and 10 drug-disease co-targets were screened out by using the Wayne diagrams, and the GO function enrichment analysis showed that the biological processes and functions of Artemisia caruifolia in treating LN were mainly focused on the bacterial response, the membrane microregion, cytokine receptor binding, signaling receptor modulating activity et al. KEGG pathway enrichment analysis showed that the treatment of LN by Artemisia caruifolia was mainly related to AGE-RAGE signaling pathway, fluid shear stress, TNF signaling pathway, lipids and atherosclerosis, PI3K/AKT signaling pathway and IL-17 signaling pathway. Conclusion By analyzing the main active ingredients of the drug, constructing PPI network and Artemisia-active ingredient-target-disease network diagram and performing GO function enrichment and KEGG pathway enrichment analysis, it reveals that the treatment of LN by Artemisia caruifolia has the characteristics of multi-components, multi-targets and multi-pathways of action, and it provides ideas and methods for the mechanism of Artemisia caruifolia's clinical application in the treatment of LN.

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  • 收稿日期:2024-04-01
  • 最后修改日期:2024-05-06
  • 录用日期:2024-05-10
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